SBML2LATEX: Conversion of SBML files into human-readable reports

SBML2LaTEX: Conversion of SBML files into human-readable reports

SUMMARY The XML-based Systems Biology Markup Language (SBML) has emerged as a standard for storage, communication and interchange of models in systems biology. As a machine-readable format XML is difficult for humans to read and understand. Many tools are available that visualize the reaction pathways stored in SBML files, but many components, e.g. unit declarations, complex kinetic equations o...

1 CELLML 2 SBML : CONVERSION OF CELLML INTO SBML Running head : Conversion of CellML into SBML

Summary: CellML and SBML are XML-based languages for storage and exchange of molecular biological and physiological reaction models. They use very similar subsets of MathML to specify the mathematical aspects of the models. CellML2SBML is implemented as a suite of XSLT stylesheets that, when applied consecutively, convert models expressed in CellML into SBML without significant loss of informat...

CellML2SBML: conversion of CellML into SBML

UNLABELLED CellML and SBML are XML-based languages for storage and exchange of molecular biological and physiological reaction models. They use very similar subsets of MathML to specify the mathematical aspects of the models. CellML2SBML is implemented as a suite of XSLT stylesheets that, when applied consecutively, convert models expressed in CellML into SBML without significant loss of inform...

Appraisal Strategies for Machine-Readable Case Files

Including Layout Information in SBML Files Version 1.1a